Changelog¶
All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
Unreleased¶
Added¶
Changed¶
Removed¶
[0.0.12] - 2021-07-19¶
Added¶
functions to handle multi-cell masks (topological domains)
napari + napari_imc to view MCD files
Changed¶
fix support of OSX in ilastik segmentation
centralized package data under
.imc
0.0.11 - 2021-07-01¶
Added¶
Command
imc process.
0.0.10 - 2021-07-01¶
Added¶
CI on Github actions
add more CLI commands
Changed¶
centralized package data under
.imcfix packaging
0.0.8 - 2021-06-01¶
Added¶
add
.pyproject.tomlsupport subcellular mask quantification
Changed¶
rasterized linecollection plots by default
0.0.7 - 2021-04-26¶
Added¶
initial support subcellular mask quantification
DeepCell postprocessing to match nuclear and cellular masks
function to plot and extract panorama images matching ROIs
Cellpose as segmentation method
add CLI command for segmentation
Changed¶
rasterized linecollection plots by default
0.0.6 - 2020-12-16¶
Added¶
segmentation module
mask layers to support alternative segmentations
Changed¶
rasterized linecollection plots by default
Removed¶
graphics code that was abstracted to
seaborn_extensionsmodule
0.0.5 - 2020-12-07¶
Added¶
segmentation module
mask layers to support alternative segmentations
Changed¶
export panoramas by default
support ome-tiff
upgrade to
imctools==2.1.0
0.0.4 - 2020-10-07¶
0.0.3 - 2020-06-17¶
Changed¶
Patch
pathlib.Pathto support path building with+(operator overload)
0.0.2 - 2020-06-15¶
Added¶
Many features
0.0.1 - 2020-04-14¶
Added¶
Project, Sample and ROI modules/objects